I think you need to do some further tweaking. As it currently stands, the skill rework is a bit of an epic fail.
I appreciate that you're trying to get away from the old "MUST TAKE CONCEALMENT EXPERT ON EVERYTHING" meta, but I don't think you've succeeded.
Seems that we're now spending 21 points to get what we used to get from 19 points.
Some of the skills with conditions on them are just flatout stupid (the cruiser ones for example). The enhanced HE/AP skill (i forget exactly which one it is) that penalises you with an extra 30% fire/flood duration is just mindblowingly stupid.
Supercruisers have always had problems with HE spam fires and now it's even worse with no tanking skills to help out.
Seriously guys, have another think about this and please listen to the community contributors who I'm sure have been giving you far more valuable feedback than you're getting from this thread.